13 June 2009 : Bundesliga Transfers Updated| Player | Position | From | To | Fee €m | |
| Braafheid | DF | Twente | Bayern Munich | 2.50 | |
| Gomez | FW | Stuttgart | Bayern Munich | 30.00 | |
| Olic | FW | Hamburg | Bayern Munich | Free | |
| Tymoschuk | MF | Zenit St Petersburg | Bayern Munich | 14.50 | |
| Van Gaal | Coach | AZ Alkmaar | Bayern Munich | 2011 | |
| Moreno | MF | Shakhtar Donetsk | Bremen | Loan | |
| Skibbe | Coach | Galatasaray | Frankfurt | u/d | |
| Demel | DF | Contract Extension | Hamburg | 2012 | |
| Labbadia | Coach | Leverkusen | Hamburg | u/d | |
| Bruggink | FW | Contract Extension | Hannover | 2010 | |
| Haggui | DF | Leverkusen | Hannover | Free | |
| Maicosuel | MF | Botafogo | Hoffenheim | 4.50 | |
| Tagoe | FW | Al-Ettifaq | Hoffenheim | u/d | |
| Podolski | FW | Bayern Munich | Koln | 7.50 | |
| Soldo | Coach | Diamo Zagreb | Koln | u/d | |
| Derdiyok | FW | Basel | Leverkusen | u/d | |
| Heynckes | Coach | Out of contract | Leverkusen | u/d | |
| Hyppia | DF | Liverpool | Leverkusen | Free | |
| Magath | Coach | Wolfsburg | Schalke | 2013 | |
| Riedle | FW | Grasshoppers | Stuttgart | u/d | |
| Josue | MF | Contract Extension | Wolfsburg | 2013 | |
| Kahlenberg | MF | Auxerre | Wolfsburg | u/d | |
| Madlung | DF | Contract Extension | Wolfsburg | 2013 | |
| Veh | Coach | Stuttgart | Wolfsburg | 2011 | |
| 59.00 | |||||
| u/d = undisclosed | |||||